Ohio State, Penn State, and North Carolina are not allowed to enter the BCS Standings because they can not go to bowls for various reasons. UTSA, UMASS, Texas State, and South Alabama are not allowed to enter the BCS Standings because they can not go to bowls because this is there first year.
| Rank | BCS | Me |
|---|---|---|
| 1 | Alabama 6-0 | Alabama 6-0 |
| 2 | Florida 6-0 | Oregon 6-0 |
| 3 | Oregon 6-0 | Florida 6-0 |
| 4 | Kansas State 6-0 | Notre Dame 6-0 |
| 5 | Notre Dame 6-0 | Kansas State 6-0 |
| 6 | LSU 6-1 | LSU 6-1 |
| 7 | South Carolina 6-1 | Oregon State 5-0 |
| 8 | Oregon State 5-0 | South Carolina 6-1 |
| 9 | Oklahoma 4-1 | Oklahoma 4-1 |
| 10 | USC 5-1 | USC 5-1 |
| 11 | Georgia 5-1 | Mississippi State 6-0 |
| 12 | Mississippi State 6-0 | Florida State 6-1 |
| 13 | West Virginia 5-1 | Georgia 5-1 |
| 14 | Florida State 6-1 | Louisville 6-0 |
| 15 | Rutgers 6-0 | Rutgers 6-0 |
| 16 | Louisville 6-0 | West Virginia 5-1 |
| 17 | Texas Tech 5-1 | Clemson 5-1 |
| 18 | Texas A&M 5-1 | Texas A&M 5-1 |
| 19 | Clemson 5-1 | Texas Tech 5-1 |
| 20 | Stanford 4-2 | Cincinati 5-0 |
| 21 | Cincinati 5-0 | Boise State 5-1 |
| 22 | Boise State 5-1 | Stanford 4-2 |
| 23 | TCU 5-1 | Ohio 7-0 |
| 24 | Iowa State 4-2 | Arizona State 5-1 |
| 25 | Texas 4-2 | Michigan |